CDS
| Accession Number | TCMCG057C25376 |
| gbkey | CDS |
| Protein Id | XP_018490858.1 |
| Location | join(21801228..21801252,21801549..21801679,21801766..21801883,21801961..21802187,21802271..21802373,21802488..21802558,21802851..21802925,21803018..21803161,21803235..21803397,21803608..21803985,21804067..21804300,21804716..21805479,21805572..21805646,21805735..21805847,21805932..21806048,21806141..21806209,21806327..21806387) |
| Gene | LOC108861482 |
| GeneID | 108861482 |
| Organism | Raphanus sativus |
Protein
| Length | 955aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018635356.1 |
| Definition | PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04812 [VIEW IN KEGG] |
| KEGG_ko |
ko:K18643
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000151
[VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0031461 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0080008 [VIEW IN EMBL-EBI] GO:1902494 [VIEW IN EMBL-EBI] GO:1990234 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCGAAGCGTGGATATAAGCTGCAGGAGTTCTTGGCACATTCCGGAAATGTGAATTGTCTAAGTATCGGAAAGAAGACATCACGGTTCCTTATAACCGGAGGAGATGATTGTAAGGTCAACCTCTGGTCAATCGGCAAGTCTACCTCTCTCATGAGTCTTTGTGGACATTCAAGCCCTGTTGACTCGGTAGCTTTCAACTCTGAAGAAGCTTTGGTCCTCGCTGGAGCTTCTTCTGGCGTGATTAAGCTGTGGAATCTACAAGAAGCTAAGGTGGTTCGAGCTTTTACTGGACACATATCAAACTGTTCTGCTCTTGAGTTTCATCCGTTTGGCCAGTACCTTGCATCCGGATCAAGTGACACAAATCTAAAGATTTGGGATATCAGAAAGAAAGGATGCATCCAAACATACAAAGGTCACACTCGTGGCATTAGTACTGTCAAATTTACTCCTGATGGGCGTTGGTTAGTGTCTGGTGGACTTGATAACGTTGTAAAGATTTGGGATATAACTGCTGGAAAGCTCCTGCATGAGTTTAAGTTTCATGATGGACCTATCCGTTCCCTAGACTTCCACCCTCTTGAGTTTCTCCTAGCCTCTGGTTCTGCAGACAGGACTGTGAAATTCTGGGACTTAGAAACGTTTGAATTGATTGGATCTACTAGACCAGAGGCTACTGGAGTTCGCCCAATCGCTTTTCATCCAGATGGACGAACCCTTTTCTGTGGATTAGATGACGGCTTGAAGGTTTATTCATGGGAACCAGTGATATGCCGGGATAGTGTTGATATGGGATGGTCAACCCTTGGTGACTTGTGCATCAACGAAAACAAGTTCGTTGGCTGTTCATATTACCGAAATTCTGTTGGGATTTGGGTCTCAGATATATCGAAACTTGAGCCGTATGGAGCTGGATCTGAGGATAAGAAGGAATGCATGGTGAAAAGATTCAGTGCCTTGGAGGACCAGTCGTCTGAGAGAAAGGGGAGTGGCTCAAGGGGGAGTTCATCCCCGGACTATGAGACAAAAGAGATAAAGAACATATACGTTGACTGTGGAAATTTGAAAGCGGGTATTAGGGCGAGCGAGAAGCAGAATGCAACAACATGTTTTGGACAAGCAGAGGACAAGTCTTCCAGAATGCATAGTGTTGTGGATAGTGATAGTGGGGAAGAATCTTCTCATTCAAGAAGGGAATCTATAGCTTCCTCAAAAACTAGTCCGGGAATACTGCTAAGACCAGCTCATGTTAGAAAGACTCTAGCAAAGTTTGAAGAATCAGTGTCTGCTCAATCTGGAACTCGGAAGAAGAGCGCATTGGATGTTGAAGAGGAGACACAAACTCGAAATGCTGAAGACTCAACCATCAAGGGAATTATGTACAAATTTGAAAAAGCTTTATCATCGGAACCACCAACTGATGAAGCGAATCGTATGCTGCATAAGCCACCTCGTGCACAGAGGTCATCATATAACAACTACAATGAGTCAAGACGAGCAATGTCTGTTGATTCTGCGACTTACAGCGATAGCAAAGATGGGTTGGAGTATTCAGGAGACTTACCGACAGGTGGAAACTTATGCAATGAGGATGTAAACAACCAGCACACTGCCACCAAAACTGAAAGAGTTCTTTCACCAGAAAAGCCTGGTGATGAACAGAAAATAAAAGTTGTCTCCGGGAGGACACGCTCATTGGTTGAGAAGTTTGAGAGAGGAGAAAAAATTACTCATACCGAAGCAGAGAATACTAATGCAGTGGAGCAAGATCCGCATAAGACATCAAGACAGGCAGGTGAAACTCCTGTAGTAGCTTCTACACGACGAGCTAGAAGTACTCCAGCTCGAGTGATGCCTATAGTACTCAACCGGGATAGTAACATGAAATCTGATGAGCTTCCTTCAACGCAACCAGCTAGGACTTCTTCAGTTCCAGTGATGCCTATGATACTCAATCAGCCTACCAATGATGAGCCTTCTGTAACATTAACACCATCTAGAACTTCTCCGGCCCGGACATTGCCCTTGACACTGGATCAGACAACAAATGTTGCATATGGTGAGGTTTCTGTTATGTCAAGAAGACCACGCAGGACTTCCTCAGCTCGAGTAAGGCCTATGTTACTCAGTCAGACATCTCATGAGTGTCTTGTAACATCAACACGTTCAGATAGGACTTCTCCAGCCCGTGTAATGCCATCAAAACTCAATCAAACCGATGACATGACATCGGATACATGTCATAGCACGTCCAGGCGCCGAGCTAGCTCATCTCAAATGCTGGCTACACCCACTGAGATTGATCAGGTGGTTGATATGGCTCAGGATGAGGCAAATGTATCACAAACTGATAGTGACATCACTGAGAATCTAATGCAAACTCATGAGGAGTTCTTAAGCACTCTTCAATCTAGATTGACAAAATTACAAATTGTTAGGCATTTTTGGGAACGTAGCGATGTTAAAGGCGCGATAGGGGCTTTGAGAAAGCTGACAGATCAGTCTGTTCAAGCAGATGTGATCAGTATTTTAACAGACAAGATAGAGATTCTCACATTGGATATGTTCTCTCAGTTGGTCCCTGTCCTCACAAGCTTATTGGGTAGCAGGACAGAGAGGCCTGTGAATGTCTCCTTGGACATGCTCTTGAAGCTTGTAGCAGTGTTCGGTACAGTTATTCGCTCAACTGTCTCAGCTCCACGGATAGTTGGCGTTGATCTTCATGCGGATGAAAGGATACAAATCTGCCAAGTTTGTTCTGCGGGACTGCACAAGATTCAAAGGATTCTTCCAATTCTCGCTAGAAGAGGCGGTCTAATATCAAGAAAGGCTCAGGAACTAAACCTTGTTCTTCAACAGACATAG |
| Protein: MAKRGYKLQEFLAHSGNVNCLSIGKKTSRFLITGGDDCKVNLWSIGKSTSLMSLCGHSSPVDSVAFNSEEALVLAGASSGVIKLWNLQEAKVVRAFTGHISNCSALEFHPFGQYLASGSSDTNLKIWDIRKKGCIQTYKGHTRGISTVKFTPDGRWLVSGGLDNVVKIWDITAGKLLHEFKFHDGPIRSLDFHPLEFLLASGSADRTVKFWDLETFELIGSTRPEATGVRPIAFHPDGRTLFCGLDDGLKVYSWEPVICRDSVDMGWSTLGDLCINENKFVGCSYYRNSVGIWVSDISKLEPYGAGSEDKKECMVKRFSALEDQSSERKGSGSRGSSSPDYETKEIKNIYVDCGNLKAGIRASEKQNATTCFGQAEDKSSRMHSVVDSDSGEESSHSRRESIASSKTSPGILLRPAHVRKTLAKFEESVSAQSGTRKKSALDVEEETQTRNAEDSTIKGIMYKFEKALSSEPPTDEANRMLHKPPRAQRSSYNNYNESRRAMSVDSATYSDSKDGLEYSGDLPTGGNLCNEDVNNQHTATKTERVLSPEKPGDEQKIKVVSGRTRSLVEKFERGEKITHTEAENTNAVEQDPHKTSRQAGETPVVASTRRARSTPARVMPIVLNRDSNMKSDELPSTQPARTSSVPVMPMILNQPTNDEPSVTLTPSRTSPARTLPLTLDQTTNVAYGEVSVMSRRPRRTSSARVRPMLLSQTSHECLVTSTRSDRTSPARVMPSKLNQTDDMTSDTCHSTSRRRASSSQMLATPTEIDQVVDMAQDEANVSQTDSDITENLMQTHEEFLSTLQSRLTKLQIVRHFWERSDVKGAIGALRKLTDQSVQADVISILTDKIEILTLDMFSQLVPVLTSLLGSRTERPVNVSLDMLLKLVAVFGTVIRSTVSAPRIVGVDLHADERIQICQVCSAGLHKIQRILPILARRGGLISRKAQELNLVLQQT |